Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging

Ileana O. Jelescu; Francesco Grussu; Andrada Ianus; Brian Hansen; Rachel L.C. Barrett; Manisha Aggarwal; Stijn Michielse; Fatima Nasrallah; Warda Syeda; Nian Wang; Jelle Veraart; Alard Roebroeck; Andrew F. Bagdasarian; Cornelius Eichner; Farshid Sepehrband; Jan Zimmermann; Lucas Soustelle; Christien Bowman; Benjamin C. Tendler; Andreea Hertanu; Ben Jeurissen; Marleen Verhoye; Lucio Frydman; Yohan van de Looij; David Hike; Jeff F. Dunn; Karla Miller; Bennett A. Landman; Noam Shemesh; Adam Anderson; Emilie McKinnon; Shawna Farquharson; Flavio Dell'Acqua; Carlo Pierpaoli; Ivana Drobnjak; Alexander Leemans; Kevin D. Harkins; Maxime Descoteaux; Duan Xu; Hao Huang; Mathieu D. Santin; Samuel C. Grant; Andre Obenaus; Gene S. Kim; Dan Wu; Denis Le Bihan; Stephen J. Blackband; Luisa Ciobanu; Els Fieremans; Ruiliang Bai; Trygve B. Leergaard; Jiangyang Zhang; Tim B. Dyrby; G. Allan Johnson; Julien Cohen-Adad; Matthew D. Budde; Kurt G. Schilling

doi:10.1002/mrm.30429

Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging

Ileana O. Jelescu
, Francesco Grussu
, Andrada Ianus
, Brian Hansen
, Rachel L.C. Barrett
, Manisha Aggarwal
, Stijn Michielse
, Fatima Nasrallah
, Warda Syeda
, Nian Wang
, Jelle Veraart
, Alard Roebroeck
, Andrew F. Bagdasarian
, Cornelius Eichner
, Farshid Sepehrband
, Jan Zimmermann
, Lucas Soustelle
, Christien Bowman
, Benjamin C. Tendler
, Andreea Hertanu

Ben Jeurissen, Marleen Verhoye, Lucio Frydman, Yohan van de Looij, David Hike, Jeff F. Dunn, Karla Miller, Bennett A. Landman, Noam Shemesh, Adam Anderson, Emilie McKinnon, Shawna Farquharson, Flavio Dell'Acqua, Carlo Pierpaoli, Ivana Drobnjak, Alexander Leemans, Kevin D. Harkins, Maxime Descoteaux, Duan Xu, Hao Huang, Mathieu D. Santin, Samuel C. Grant, Andre Obenaus, Gene S. Kim, Dan Wu, Denis Le Bihan, Stephen J. Blackband, Luisa Ciobanu, Els Fieremans, Ruiliang Bai, Trygve B. Leergaard, Jiangyang Zhang, Tim B. Dyrby, G. Allan Johnson, Julien Cohen-Adad, Matthew D. Budde, Kurt G. Schilling

Research output: Contribution to journal › Review article › peer-review

Original language	English
Pages (from-to)	2507-2534
Number of pages	28
Journal	Magnetic Resonance in Medicine
Volume	93
Issue number	6
DOIs	https://doi.org/10.1002/mrm.30429
State	Published - Jun 2025
Externally published	Yes

ASJC Scopus Subject Areas

Radiology Nuclear Medicine and imaging

Keywords

acquisition
best practices
diffusion MRI
diffusion tensor
microstructure
open science
preclinical
processing
small animal
tractography
Reproducibility of Results
Brain/diagnostic imaging
Animals
Image Processing, Computer-Assisted/methods
Diffusion Magnetic Resonance Imaging/methods
Software
Mice

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10.1002/mrm.30429

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Jelescu, I. O., Grussu, F., Ianus, A., Hansen, B., Barrett, R. L. C., Aggarwal, M., Michielse, S., Nasrallah, F., Syeda, W., Wang, N., Veraart, J., Roebroeck, A., Bagdasarian, A. F., Eichner, C., Sepehrband, F., Zimmermann, J., Soustelle, L., Bowman, C., Tendler, B. C., ... Schilling, K. G. (2025). Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging. Magnetic Resonance in Medicine, 93(6), 2507-2534. https://doi.org/10.1002/mrm.30429

Jelescu, IO, Grussu, F, Ianus, A, Hansen, B, Barrett, RLC, Aggarwal, M, Michielse, S, Nasrallah, F, Syeda, W, Wang, N, Veraart, J, Roebroeck, A, Bagdasarian, AF, Eichner, C, Sepehrband, F, Zimmermann, J, Soustelle, L, Bowman, C, Tendler, BC, Hertanu, A, Jeurissen, B, Verhoye, M, Frydman, L, van de Looij, Y, Hike, D, Dunn, JF, Miller, K, Landman, BA, Shemesh, N, Anderson, A, McKinnon, E, Farquharson, S, Dell'Acqua, F, Pierpaoli, C, Drobnjak, I, Leemans, A, Harkins, KD, Descoteaux, M, Xu, D, Huang, H, Santin, MD, Grant, SC, Obenaus, A, Kim, GS, Wu, D, Le Bihan, D, Blackband, SJ, Ciobanu, L, Fieremans, E, Bai, R, Leergaard, TB, Zhang, J, Dyrby, TB, Johnson, GA, Cohen-Adad, J, Budde, MD & Schilling, KG 2025, 'Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging', Magnetic Resonance in Medicine, vol. 93, no. 6, pp. 2507-2534. https://doi.org/10.1002/mrm.30429

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AU - Grussu, Francesco

AU - Ianus, Andrada

AU - Hansen, Brian

AU - Barrett, Rachel L.C.

AU - Aggarwal, Manisha

AU - Michielse, Stijn

AU - Nasrallah, Fatima

AU - Syeda, Warda

AU - Wang, Nian

AU - Veraart, Jelle

AU - Roebroeck, Alard

AU - Bagdasarian, Andrew F.

AU - Eichner, Cornelius

AU - Sepehrband, Farshid

AU - Zimmermann, Jan

AU - Soustelle, Lucas

AU - Bowman, Christien

AU - Tendler, Benjamin C.

AU - Hertanu, Andreea

AU - Jeurissen, Ben

AU - Verhoye, Marleen

AU - Frydman, Lucio

AU - van de Looij, Yohan

AU - Hike, David

AU - Dunn, Jeff F.

AU - Miller, Karla

AU - Landman, Bennett A.

AU - Shemesh, Noam

AU - Anderson, Adam

AU - McKinnon, Emilie

AU - Farquharson, Shawna

AU - Dell'Acqua, Flavio

AU - Pierpaoli, Carlo

AU - Drobnjak, Ivana

AU - Leemans, Alexander

AU - Harkins, Kevin D.

AU - Descoteaux, Maxime

AU - Xu, Duan

AU - Huang, Hao

AU - Santin, Mathieu D.

AU - Grant, Samuel C.

AU - Obenaus, Andre

AU - Kim, Gene S.

AU - Wu, Dan

AU - Le Bihan, Denis

AU - Blackband, Stephen J.

AU - Ciobanu, Luisa

AU - Fieremans, Els

AU - Bai, Ruiliang

AU - Leergaard, Trygve B.

AU - Zhang, Jiangyang

AU - Dyrby, Tim B.

AU - Johnson, G. Allan

AU - Cohen-Adad, Julien

AU - Budde, Matthew D.

AU - Schilling, Kurt G.

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KW - microstructure

KW - open science

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KW - processing

KW - small animal

KW - tractography

KW - Reproducibility of Results

KW - Brain/diagnostic imaging

KW - Animals

KW - Image Processing, Computer-Assisted/methods

KW - Diffusion Magnetic Resonance Imaging/methods

KW - Software

KW - Mice

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Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging

ASJC Scopus Subject Areas

Keywords

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